Wont affect the C/R, the deck height of the two blocks are the same.
In simple terms C/R is the how much the piston will "squish" the air fuel mixture at the top of the compression stroke.
For instance 9:1 comp ratio is the air fuel mixture compressed 9 times its original volume in the cylinder at the top of the compression stroke.
Higher C/R = more squish, which = more bang. It is limited however by a number of things, fuel octane being one.
Basically N/A cars run a higher C/R and forced induction ones a lower C/R as forced induction fills the cylinders past 100% volumetric efficiency anyway.
I'm sure Hiro can explain further.
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