You said it is a Gen 2 motor on Gen 1 "hardware".
It is probably running lean under the conditions that it is pinging.
You could monitor the O2 sensor to confirm this, or do something to richen it up.
Are the Aus Gen 1 3SG airflow meter type?
If so, mark the original position of the spring in the airflow meter, and then loosen the spring about 2-3 notches.
I used mine with the Gen 2 manifolds and injectors, using the Gen 1 ECU. No pinging, but a definite flat spot until I gave it a little more fuel.
As Dale alluded to, check for intake leaks. Given that you just finished the swap, a double check of the basics couldn't hurt.
Could you confirm what is meant by "short motor"?
I don't want to base suggestions on a possible misunderstanding.
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