I would start from the simplest things.
First of all, it's a swap so you could forget to connect something. Most likely, a power line. Usually, VSVs, MAF and O2 sensor all receive power from master relay, and this node is also present at diagnostic connector. So check that power is delivered to the MAF sensor. Right at the MAF connector when ignition is on. The p0101 that states MAF signal is out of range points that the part might be not powered or not connected.
That would do, but if not, check all the MAF wiring from MAF connector to ECU connector to ensure no circuit breaks.
If that does not help, check if harness screens are grounded. There must be a connector sealed on one side where plenty of brown wires come. They are connected together there and they must all show 0 - 2 Ohms to intake manifold.
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