You get rep for supporting your question with supporting info - I wish more people would take note and follow your example!
As for your issues:
1: Try a different battery - you've had the vehicle off the road for approximately 2 months, which may be long wenough for an old battery to drain and alter the internal matrix (especially if it went flat over that time). If the "newer" replacement battery cranks faster/better, I'd say you'll be up for a new battery shortly. If the cranking speed remains the same, including the duration till it kicks into life, I'd look at your injectors and fuel pressure - I've had injectors that have sat for period of time start leaking - they lose pressure behind the injector, and it took a couple of cranking revs to regain the pressure for the injectors to fire adequately.
2: Assuming you're driving in the same style and locations, and that you don't have any error codes as mentioned, maybe it time to look at the mixtures coming out of the tailpipe. Check your idle adjustments on the AFM, ISCV, and oxygen sensor - they may not be throwing an error but double check them all. also consider it may be time to service the injectors - this would account for issues in your cranking too. If they haven't been done recently, it's worth spending the money to have them cleaned properly and the filters replaced, along with a flow test - it will eliminate possible causes too once done, and confirmed as servicable, and it doesn't cost that much to do.
3: Check TB for build up of carbon, oil, ..., check vacuum lines, check air lines, go mad with the soapy water to check for vacuum leaks, and check the sensors and lines to them. Check coolant lines to the to and from the TB for flow.
Clint
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