I would say that emissions will be all over the place because the ae82 4age ecu cant read boost accurately.
Is the engineer going to look for the ecu and check it right out?
If not just leave the old ecu in there wire it to the igniton so that if unplugged the engine will stall but hide the aftermarket ecu well.
Other than that take the wastegate actuator off and run the turbo on 0 psi. I did this when i first got my motor cranking over and a few trips around the block.
Now 1 year later the turbo boosts at 20psi no worries.
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