I don't think it's as easy as just swapping the output shaft.
A 1JZ-GTE auto did not have a sufficiently similar output shaft to use in the JZS147 box. The 7M-GE cressida box did though, but some portions of the 7M box had to be used in the combination (eg some planetary gears).
You can't get your tailshaft modified? In the MX83 the shifter wouldn't fit around the donut, but in the IS200 it does (kind of), so my choice these days is to modify the tailshaft rather than stuff around with the box - everyone that I've known to swap the internals has had problems with the box, some terminal, others just nuisance.
Mos.
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