What did the 1JZ come out of?
Do you still have the speed sensor off your old box? (the newer sensors won't work with the older dash)
In terms of which pin colour goes where I can't help without referring to notes, but you should be able to just hook up your old sensor, through the transmission and engine looms, into the same pins of the engine loom to cowl loom plugs.
The speed sensor signal goes from the sensor, through the transmission loom, through the engine loom, through the cowl or dash loom to the cluster for the speedo. The cluster also divides this signal by 5 and sends it to the ECU. Purple is usually the speed sensor signal to the ECU.
Mos.
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